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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177104584_177106052_R

Intron Information:

Intron Rank:

136361

Intron Class:

major

Intron Phase:

Intron Coordinates:

177104584 - 177106052

Intron Length:

1469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

24.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.72

0.8

79.2

33.1

Minor 5ss

43.1

-0.8

3.1

62.8

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046391

177104033 - 177107247

3215

ENSAPLT00000020671

177104033 - 177127276

23244