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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177239405_177241336_R

Intron Information:

Intron Rank:

130227

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

177239405 - 177241336

Intron Length:

1932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTATT

5'SS Class:

weak_major

3'SS Sequence:

CTGTCTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

AAGCCTAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

83.5

35.1

Major BPS

0.52

1.5

79.6

35.6

Major PPT

77.5

0.62

0.8

72.1

32.6

Minor 5ss

61.6

0.39

2.1

77.4

37.4

Minor BPS

46.1

-0.2

1.9

61.98

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034962

177227018 - 177248152

21135