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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177290397_177291431_F

Intron Information:

Intron Rank:

139687

Intron Class:

major

Intron Phase:

Intron Coordinates:

177290397 - 177291431

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

TGTGCCTTCAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

51.1

0.03

1.6

43.2

Major PPT

93.5

0.98

0.6

92.1

18.4

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

50.8

0.01

2.2

66.71

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029335

177289891 - 177292585

2695