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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177523738_177537159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

177523738 - 177537159

Intron Length:

13422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACCG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

0.6

65.6

41.1

Major PPT

74.4

0.55

0.9

74.4

35.5

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

0.58

1.6

78.9

38.1

Associated Gene:

Gene:

NDFIP2

Ensembl Gene ID:

ENSAPLG00000011385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038668

177522286 - 177580556

58271