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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177535307_177537159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

177535307 - 177537159

Intron Length:

1853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTTTCTTTATCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

87.5

0.84

0.7

85.5

27.9

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

73.3

0.81

1.6

87.39

38.7

Associated Gene:

Gene:

NDFIP2

Ensembl Gene ID:

ENSAPLG00000011385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018745

177534165 - 177580399

46235

ENSAPLT00000011876

177534165 - 177580399

46235