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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177537266_177541066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

177537266 - 177541066

Intron Length:

3801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTACACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

ATATAATTAATT

Flanking Amino Acid:

YWLWWIFLVLGLLLFFRGFV

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

0.82

0.8

24.9

Major PPT

76.4

0.59

0.9

66.4

39.6

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

60.5

0.41

1.8

78.01

37.7

Associated Gene:

Gene:

NDFIP2

Ensembl Gene ID:

ENSAPLG00000011385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038668

177522286 - 177580556

58271

ENSAPLT00000018745

177534165 - 177580399

46235

ENSAPLT00000011876

177534165 - 177580399

46235