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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177541134_177544196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

177541134 - 177544196

Intron Length:

3063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTATGAATTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCTGTATGAATT

Flanking Amino Acid:

SLIKWILIVRFSDYFTGYFN

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

80.5

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

67.2

0.39

1.1

47.6

Minor 5ss

56.3

0.21

2.4

44.2

Minor BPS

49.3

0.02

1.8

69.15

42.2

Associated Gene:

Gene:

NDFIP2

Ensembl Gene ID:

ENSAPLG00000011385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011876

177534165 - 177580399

46235

ENSAPLT00000038668

177522286 - 177580556

58271

ENSAPLT00000018745

177534165 - 177580399

46235