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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177552314_177559818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

177552314 - 177559818

Intron Length:

7505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CCTGTAAATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAAAT

Flanking Amino Acid:

AAAAAEVAQREEEYPPRDDF

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.6

0.35

55.7

42.9

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

65.4

0.56

1.9

88.15

35.9

Associated Gene:

Gene:

NDFIP2

Ensembl Gene ID:

ENSAPLG00000011385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011876

177534165 - 177580399

46235