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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177561567_177580147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

177561567 - 177580147

Intron Length:

18581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAA

U12 Branch Point Sequence:

ATTGCCTGAAAT

Flanking Amino Acid:

HHQPASRYQVLHNEDDPPES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

Major BPS

50.4

0.01

1.1

47.3

36.1

Major PPT

85.6

0.8

0.9

91.1

21.3

Minor 5ss

32.3

-2

3.3

39.1

40.7

Minor BPS

63.7

0.51

1.7

80.99

40.1

Associated Gene:

Gene:

NDFIP2

Ensembl Gene ID:

ENSAPLG00000011385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011876

177534165 - 177580399

46235

ENSAPLT00000018745

177534165 - 177580399

46235