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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177842483_177846849_F

Intron Information:

Intron Rank:

141390

Intron Class:

major

Intron Phase:

Intron Coordinates:

177842483 - 177846849

Intron Length:

4367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TATTATTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.7

0.8

77.4

41.1

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048415

177836408 - 177846975

10568