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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177853578_177863006_R

Intron Information:

Intron Rank:

144527

Intron Class:

major

Intron Phase:

Intron Coordinates:

177853578 - 177863006

Intron Length:

9429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTAT

5'SS Class:

major

3'SS Sequence:

TTTCATCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATATCTTTCATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

66.7

41.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.8

0.81

0.8

77.4

36.6

Minor 5ss

42.9

-0.8

3.5

64.2

47.3

Minor BPS

0.3

1.7

69.19

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023549

177808741 - 177863073

54333