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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177951061_177951476_F

Intron Information:

Intron Rank:

129054

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

177951061 - 177951476

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAATTTCC

5'SS Class:

major

3'SS Sequence:

AAAAATATACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTATGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

70.7

33.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

52.5

0.06

1.1

42.1

45.9

Minor 5ss

-0.7

2.7

58.8

38.7

Minor BPS

60.2

0.4

1.6

79.08

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033036

177950660 - 177959832

9173