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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177952338_177959352_F

Intron Information:

Intron Rank:

129056

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

177952338 - 177959352

Intron Length:

7015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

CATCACATGTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TTTTCTATACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.2

58.4

42.3

Major BPS

74.9

0.62

81.3

29.9

Major PPT

57.8

0.18

55.6

39.4

Minor 5ss

40.1

-1.1

3.1

57.4

46.8

Minor BPS

55.8

0.26

82.07

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033036

177950660 - 177959832

9173