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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1779537_1801255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1779537 - 1801255

Intron Length:

21719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

GAAATCAAAATG

Flanking Amino Acid:

KAADEVSARFKRYESHPVCA

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

62.4

0.31

32.1

Major PPT

83.4

0.75

0.7

76.5

32.1

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

40.8

-0.8

1.8

39.67

37.4

Associated Gene:

Gene:

CHCHD3

Ensembl Gene ID:

ENSAPLG00000005618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042299

1657693 - 1809286

151594

ENSAPLT00000017919

1657693 - 1806853

149161