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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177977899_177979802_R

Intron Information:

Intron Rank:

152956

Intron Class:

major

Intron Phase:

Intron Coordinates:

177977899 - 177979802

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AGTGATGTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.1

0.59

0.9

69.4

41.7

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

42.2

-0.7

2.1

46.82

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021085

177974600 - 177980507

5908

ENSAPLT00000032169

177976971 - 177980507

3537