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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177979963_177980234_R

Intron Information:

Intron Rank:

152958

Intron Class:

major

Intron Phase:

Intron Coordinates:

177979963 - 177980234

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

100

1.24

0.5

100

Major PPT

80.9

0.7

0.9

74.5

35.8

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

63.5

0.5

1.6

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032169

177976971 - 177980507

3537

ENSAPLT00000024106

177958054 - 177980507

22454