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Intron Name: Anas_platyrhynchos_platyrhynchos_1_177981431_177981539_R

Intron Information:

Intron Rank:

138707

Intron Class:

major

Intron Phase:

Intron Coordinates:

177981431 - 177981539

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTGTTGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

CAATTATTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.3

77.9

38.6

Major BPS

75.5

0.63

66.3

40.4

Major PPT

0.63

0.9

70.2

41.3

Minor 5ss

38.3

-1.3

2.8

46.9

41.8

Minor BPS

48.6

-0.1

1.9

57.05

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019178

177981217 - 177986853

5637