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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178011963_178014949_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178011963 - 178014949

Intron Length:

2987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTACTGTATAC

Flanking Amino Acid:

VIDNVEKLKEANKKLSMENN

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

84.3

0.77

0.6

84.8

22.9

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

45.5

-0.3

2.3

64.04

41.6

Associated Gene:

Gene:

OBI1

Ensembl Gene ID:

ENSAPLG00000012233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012730

178004403 - 178026543

22141