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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178154585_178160573_F

Intron Information:

Intron Rank:

140553

Intron Class:

major

Intron Phase:

Intron Coordinates:

178154585 - 178160573

Intron Length:

5989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGGAT

U12 Branch Point Sequence:

TTTCTGCTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

51.9

0.05

1.4

51.7

43.9

Major PPT

78.1

0.63

0.9

73.6

35.7

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

49.6

-0

2.3

73.2

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041166

178154338 - 178161840

7503