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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178410746_178410818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178410746 - 178410818

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAACAC

U12 Branch Point Sequence:

GGGCAAACACCT

Flanking Amino Acid:

MCWGLVCRRPLAVTKSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

78.7

34.8

Major BPS

46.4

-0.2

50.7

32.2

Major PPT

75.5

0.57

0.8

69.7

31.1

Minor 5ss

25.3

-2.8

4.1

39.2

46.2

Minor BPS

31.7

-1.3

1.9

43.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121