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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178410979_178411684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178410979 - 178411684

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TGAAGCTCACCC

Flanking Amino Acid:

EKGRRRRGTEVGADSPTGVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

38.2

Major BPS

69.8

0.49

37.5

Major PPT

69.6

0.44

0.9

64.6

30.8

Minor 5ss

31.2

-2.2

3.4

41.6

45.4

Minor BPS

42.7

-0.5

2.1

53.25

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121