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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178412180_178420720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178412180 - 178420720

Intron Length:

8541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCCATTCTAATC

Flanking Amino Acid:

IIDIPINVYKLLAEDWPFGV

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.7

0.8

75.6

32.2

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

47.6

-0.2

1.6

54.41

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121

ENSAPLT00000012830

178411354 - 178425139

13786