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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178420834_178421004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178420834 - 178421004

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

ATATATCTAATC

Flanking Amino Acid:

VLSLCALSIDRYRAVASWSR

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

71.5

40.2

Major BPS

85.7

0.89

0.8

22.2

Major PPT

83.1

0.75

0.9

80.2

37.3

Minor 5ss

30.1

-2.3

3.1

38.3

46.6

Minor BPS

49.8

-0

1.8

63.47

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121

ENSAPLT00000012830

178411354 - 178425139

13786