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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178421692_178422660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178421692 - 178422660

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTCCAATT

Flanking Amino Acid:

QIALNDHLKQRREVAKTVFC

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

100

1.24

0.5

100

Major PPT

91.2

0.93

0.7

89.3

26.1

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

49.5

0.04

1.8

71.91

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121

ENSAPLT00000012830

178411354 - 178425139

13786