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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178422795_178423383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178422795 - 178423383

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCCACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTAACTTTAATT

Flanking Amino Acid:

QKDPNRCELLSFFLVMDYIG

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

76.9

33.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

69.4

0.44

62.8

37.9

Minor 5ss

30.1

-2.3

3.1

38.6

46.4

Minor BPS

69.1

0.68

1.3

77.21

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121

ENSAPLT00000012830

178411354 - 178425139

13786