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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178425010_178470162_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

178425010 - 178470162

Intron Length:

45153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCCAGTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

AGCCCTTCAGCT

Flanking Amino Acid:

QNCFKSCLCCW*

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.2

53.2

38.4

Major BPS

51.1

0.03

1.6

43.2

Major PPT

100

1.12

0.4

100

Minor 5ss

34.2

-1.8

3.7

46.8

44.1

Minor BPS

46.9

-0.1

1.7

61.05

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021700

178410569 - 178472689

62121