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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178698244_178722130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178698244 - 178722130

Intron Length:

23887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGAGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATTATAATT

Flanking Amino Acid:

SDRELGSHPGRSKKLFSKKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

58.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

100

1.12

0.4

100

Minor 5ss

37.1

-1.5

3.3

52.2

44.6

Minor BPS

55.6

0.25

1.6

73.97

36.9

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310