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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178735864_178736083_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

178735864 - 178736083

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGTGTAA

5'SS Class:

weak_major

3'SS Sequence:

TTACTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAACT

Flanking Amino Acid:

NGSHACQTIQVPTILNSLQR

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

56.8

38.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.65

0.9

77.3

36.7

Minor 5ss

31.1

-2.2

3.3

38.4

46.6

Minor BPS

1.11

92.13

30.1

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310