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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178749972_178750510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178749972 - 178750510

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TATCACTCAACT

Flanking Amino Acid:

GKDAIYSDSTSLVTDLKGHF

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

73.9

32.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

67.9

0.4

62.7

38.8

Minor 5ss

44.9

-0.5

2.8

55.6

43.2

Minor BPS

0.45

1.8

80.87

39.8

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310