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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178753451_178755539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178753451 - 178755539

Intron Length:

2089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTAATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTTTCTTAATG

Flanking Amino Acid:

KEMIPLDLLLAVPVPGVNIE

Intron Amino Acid Position:

833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

32.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.4

0.64

0.9

75.1

33.5

Minor 5ss

33.9

-1.8

3.3

40.8

45.4

Minor BPS

78.8

0.77

1.2

77.24

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310