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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178783956_178785731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178783956 - 178785731

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTCTACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTC

Flanking Amino Acid:

GRGEYTAKIKLFELGPDGGD

Intron Amino Acid Position:

1254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.2

0.61

0.9

70.5

39.8

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

72.6

0.69

1.5

81.59

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310