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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178792733_178794384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178792733 - 178794384

Intron Length:

1652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGATA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTCTTTATGC

Flanking Amino Acid:

LVAHMEKLSQSEENVSGMTS

Intron Amino Acid Position:

1620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.1

79.9

34.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

84.5

0.78

0.8

80.7

30.2

Minor 5ss

32.2

-2

3.1

40.3

45.5

Minor BPS

57.6

0.22

1.9

69.42

42.8

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310