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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178796115_178796420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178796115 - 178796420

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TGTTTTATACTG

Flanking Amino Acid:

IRLDKVVPLKENVKYAIRLR

Intron Amino Acid Position:

1797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

77.9

0.63

82.4

26.6

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

46.9

-0.3

1.9

55.97

40.2

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310