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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178800593_178801817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178800593 - 178801817

Intron Length:

1225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTATGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAAGTAATAATT

Flanking Amino Acid:

IGPVAAAIPKVAVEVFGLVQ

Intron Amino Acid Position:

1938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

71.3

33.2

Major BPS

0.75

78.6

Major PPT

80.4

0.68

77.1

41.6

Minor 5ss

45.3

-0.5

2.7

60.2

44.5

Minor BPS

46.1

-0.2

1.9

63.87

40.3

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310