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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178804045_178805166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178804045 - 178805166

Intron Length:

1122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ATTTTCTGAATA

Flanking Amino Acid:

GYEFSPGSDEGIIQLEKELA

Intron Amino Acid Position:

2126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

71.3

0.66

1.3

78.35

31.5

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310