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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178809107_178810245_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

178809107 - 178810245

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGT

5'SS Class:

strong_major

3'SS Sequence:

AAAAAAATAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATCCCCACCC

Flanking Amino Acid:

LEILEEAALQVCKSHSGILG

Intron Amino Acid Position:

2172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.4

41.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

44.6

-0.3

1.1

32.9

38.2

Minor 5ss

55.9

0.2

2.5

73.6

Minor BPS

48.8

-0.1

2.1

68.64

42.4

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310