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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178810419_178811095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178810419 - 178811095

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATATTTTAATG

Flanking Amino Acid:

VPGSSGGRLARWLQPDSYAD

Intron Amino Acid Position:

2229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.5

0.55

0.9

69.5

36.8

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

58.3

0.12

1.4

57.46

38.4

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310