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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178818209_178822456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178818209 - 178822456

Intron Length:

4248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAAAA

5'SS Class:

major

3'SS Sequence:

TTGCTTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TCTTCCTTACTA

Flanking Amino Acid:

KPKAEPQPNKVRKFVAKDSA

Intron Amino Acid Position:

2439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

70.7

34.4

Major BPS

71.8

0.54

1.2

32.5

Major PPT

78.1

0.63

0.8

77.4

31.3

Minor 5ss

35.2

-1.7

2.7

40.5

45.3

Minor BPS

72.3

0.7

1.6

78.78

38.5

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310