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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178823460_178831232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178823460 - 178831232

Intron Length:

7773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LGKSLLVPVDESRSNTDDFF

Intron Amino Acid Position:

2525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.8

80.9

36.2

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310