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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178835607_178849957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178835607 - 178849957

Intron Length:

14351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATATACTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATATACTAAACA

Flanking Amino Acid:

GFDYGLGNNKGDRVNFTGAA

Intron Amino Acid Position:

2686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

61.7

0.26

1.1

56.1

42.7

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

59.9

0.31

1.9

71.97

39.5

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310