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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178857532_178859595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178857532 - 178859595

Intron Length:

2064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGAATCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTGCTTTGAATC

Flanking Amino Acid:

NKSNKENAEQEKDTRVCEHP

Intron Amino Acid Position:

3597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

74.6

0.61

1.4

34.5

Major PPT

0.45

0.9

67.2

38.1

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

55.6

0.16

1.4

63.86

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310