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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178860521_178861085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178860521 - 178861085

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

IQSGFEIMNQELCIVVCLKD

Intron Amino Acid Position:

3703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

87.8

0.85

0.7

83.5

31.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310