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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178877269_178879809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178877269 - 178879809

Intron Length:

2541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGCAT

5'SS Class:

major

3'SS Sequence:

ATTGACCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATCTCTTTGATT

Flanking Amino Acid:

HRRTKTHQRQVFKEEEEAIK

Intron Amino Acid Position:

4273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

62.9

43.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

64.9

0.33

1.1

58.4

42.3

Minor 5ss

30.4

-2.2

3.7

46.2

49.1

Minor BPS

72.1

0.78

1.1

80.61

35.6

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310