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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178879943_178880223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178879943 - 178880223

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGGACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTTTTGTGGACA

Flanking Amino Acid:

KAMVEFREQTGKPTTSSSEA

Intron Amino Acid Position:

4317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

63.3

0.3

57.8

42.4

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

48.2

-0.1

2.2

66.19

40.6

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310