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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178883374_178885619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178883374 - 178885619

Intron Length:

2246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACTA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGAAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTTGTTTAATG

Flanking Amino Acid:

AYYVCYKCKKAYFGGEARCD

Intron Amino Acid Position:

4521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.4

37.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

60.8

0.24

57.1

42.1

Minor 5ss

41.6

-0.9

3.1

56.3

47.8

Minor BPS

0.24

1.8

67.55

40.8

Associated Gene:

Gene:

MYCBP2

Ensembl Gene ID:

ENSAPLG00000012782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013438

178697972 - 178887281

189310