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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178897118_178901183_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

178897118 - 178901183

Intron Length:

4066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTTCTTTC

5'SS Class:

weak_minor

3'SS Sequence:

AACCTGCTCCAAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GAGTCCTGACTG

Flanking Amino Acid:

LFTLVELADIILQVFQYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.3

59.7

Major BPS

68.9

0.47

59.2

39.1

Major PPT

53.1

0.07

1.1

48.8

38.7

Minor 5ss

60.2

0.34

1.9

37.2

Minor BPS

47.8

-0.3

1.8

50.21

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036129

178897093 - 178901576

4484