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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178921234_178922446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178921234 - 178922446

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TCTCCCTTCATC

Flanking Amino Acid:

FKYGDLLGHLKIMHDAVGFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.4

Major BPS

0.62

1.1

77.2

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

36.2

-1.6

3.3

43.9

45.7

Minor BPS

62.8

0.38

1.8

71.44

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025328

178920125 - 178923392

3268