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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178928495_178929542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178928495 - 178929542

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

TTCTGTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ATTTCTGTATTC

Flanking Amino Acid:

LVHLSRGGAEVKIFAPNIEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

41.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

77.9

0.63

0.9

70.3

40.1

Minor 5ss

29.4

-2.4

3.5

38.7

46.6

Minor BPS

49.5

-0

2.2

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005808

178927750 - 178933216

5467