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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178929715_178931528_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178929715 - 178931528

Intron Length:

1814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

ACTCTTACATCT

Flanking Amino Acid:

VSEFDAVIFPGGFGVAKNLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

40.9

-0.6

1.8

56.4

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005808

178927750 - 178933216

5467