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Intron Name: Anas_platyrhynchos_platyrhynchos_1_178931734_178933023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178931734 - 178933023

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

TVGQDKNVDGRFPDAETASA

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.2

0.97

0.7

88.4

27.5

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005808

178927750 - 178933216

5467